Maloof Lab:ImageJ analysis: Difference between revisions
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#Select all ROIs from the multi measure window. click <code>Multi</code> in the multi measure window. Copy and paste the results into excel. | #Select all ROIs from the multi measure window. click <code>Multi</code> in the multi measure window. Copy and paste the results into excel. | ||
#To create a key: click label all ROIs. <b>YOU DO NOT WANT TO DO THIS BEFORE CLICKING MULTI, BECAUSE THE LABELS WILL BE PART OF THE IMAGE AND GET COUNTED.</b> You can then save this top slice as a jpg file. (If you choose to save as tiff, the whole stack will be saved as a multi-image tiff). | #To create a key: click label all ROIs. <b>YOU DO NOT WANT TO DO THIS BEFORE CLICKING MULTI, BECAUSE THE LABELS WILL BE PART OF THE IMAGE AND GET COUNTED.</b> You can then save this top slice as a jpg file. (If you choose to save as tiff, the whole stack will be saved as a multi-image tiff). | ||
#As an alternative to 9, if you can discard the information on your first slice, then when selecting plants, press "return" instead of "space"...this will draw the ROI. I often duplicate the first slice for just this purpose. If you decide to do this, remember to discard the first | #As an alternative to 9, if you can discard the information on your first slice, then when selecting plants, press "return" instead of "space"...this will draw the ROI. I often duplicate the first slice for just this purpose. If you decide to do this, remember to discard the first row of the results. | ||
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Latest revision as of 14:18, 5 September 2008
Room 2115 |
Analyzing camera experiments with ImageJ
To measure intensity
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