Matthew R Allegretti Week 4: Difference between revisions

Revision as of 16:10, 20 September 2016

Activity 2 Part 1 and 2 from Exploring HIV evolution: An opportunity for research.

Sketch your distance tree on paper so that you can make notes on it.
Do the clones from each subject cluster together?
Do some subjects' clones show more diversity than others?
Do some of the subjects cluster together?
Write a brief description of your tree and how you interpret the clustering pattern with respect to the similarities and potential evolutionary relationships between subjects' HIV sequences.
Copy and paste your tree from the Biology Workbench to share.

Isai Lopez
While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.
My partner and I agreed on our research topic.

Week 3 Instructions
Donovan, S., & Weisstein, A. E. (2003). Exploring HIV evolution: An opportunity for research. Stanley (Eds.), Microbes Count, 137-148.
Biology Workbench
Markham, R. B., Wang, W. C., Weisstein, A. E., Wang, Z., Munoz, A., Templeton, A., ... & Yu, X. F. (1998). Patterns of HIV-1 evolution in individuals with differing rates of CD4 T cell decline. Proceedings of the National Academy of Sciences, 95(21), 12568-12573. Retrieved from http://bioquest.org/bedrock/problem_spaces/hiv/Markham_1998.pdf

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 ==Acknowledgments==
 *[[User:Isai Lopez|Isai Lopez]]
-While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.
+*While I worked with the people noted above, this individual journal entry was completed by me and not copied from another source.
-Need to state: My partner and I agreed on our research topic.
+*My partner and I agreed on our research topic.
 ==References==