Mimulus Community: Difference between revisions

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==General Info==
[[Image:Pond.jpg|thumb|right|Mimulus guttatus]]
=The ''Mimulus'' Community=
This Wiki page has not been updated since 2009.


==People==
==Announcements==
===Labs===
[[Image:Mimi.jpg|thumb|right|Mimulus Meeting 2006 at Duke University]]
*[http://www.biology.duke.edu/willislab/labpeople.htm John Willis]
[[Image:GroupPhotoOct07.jpg|thumb|right|Mimulus Meeting 2007 at NESCent]]
*[http://dbs.umt.edu/personnel/faculty/lila_fishman.htm Lila Fishman]
*[http://faculty.washington.edu/toby/ Toby Bradshaw]
*[http://www.genetics.forestry.ubc.ca/ritland/ Kermit Ritland]
*[http://www.plantbiology.msu.edu/schemske.shtml Doug Schemske]
*[http://www.ubcbotanicalgarden.org/research/cronk.php Quentin Cronk]
*[http://www.isu.edu/~bearpau2/ Paul Beardsley]
*[http://www.biology.utah.edu/faculty2.php?inum=49 Bob Vickery]
*[http://www.ku.edu/~eeb/faculty/kellyj.html John Kelly]
*[http://www3.uakron.edu/biology/mitchell/index.html Randall Mitchell]
*[http://www.uwm.edu/Dept/Biology/Docs/Faculty/karron.html Jeffery Karron]
*[http://www.ex.ac.uk/~MRMacnai/welcome.html Mark Macnair]


===Post-Docs===
*The ''Mimulus guttatus'' IM62 genome assembly and preliminary annotation is now available for search and download from [http://www.phytozome.net/mimulus Phytozome].
[http://purugganan.gnets.ncsu.edu/people/people.html Megan Hall],
*Download the [[Media:List.doc|contact info]] for people who attended the 2007 Mimulus meeting in Durham, NC.
[http://www.biology.duke.edu/willislab/ACwebpage.htm Andrea Case],
*There are now 436 [[Media:Mimulus_populations_3_22_09.xls|''Mimulus'' populations]] currently stored at the Duke University Seed Stock Center, as of March 2009
[http://www.msu.edu/%7Eangertam/ Amy Angert],
Carrie Wu, Amy Bouck


===Grad Students===
==The Genus ''Mimulus''==
====[[Duke]]====
The genus ''Mimulus'' (historically "Scrophulariaceae," order Lamiales) has been a [http://www.mimulusevolution.org/ model plant system] for ecological and evolutionary genetics for over 50 years (Vickery, 1951). 
Arielle Cooley, Young-Wa Lee, Andrea Sweigart, [[David Lowry]], Kevin Wright


====[[University of Washington]]====
*Check out the [http://www.isu.edu/~bearpau2/Mimposter.html poster] of the phylogeny of the ''Mimulus'' genus. 
Christina Pince, Kristy Brady


====[[Michigan State University]]====
* Read a recent review about [http://www.nature.com/hdy/journal/vaop/ncurrent/abs/6801018a.html;jsessionid=6761F6C5882CFD97F5AF796018F91361  ''Mimulus'' as an emerging model system for the integration of ecological and genomic studies.]


==''Mimulus'' web sites==
*See descriptions of [[Mimulus Species]]


*Mark MacNair's collection of strange [http://www.ex.ac.uk/~MRMacnai/guttatus.html ''Mimulus guttatus'' relatives] from California
==The ''Mimulus'' Genome==
*The Willis Lab is quite excited about the release of the whole [http://www.jgi.doe.gov/sequencing/why/CSP2006/mimulus.html genome] of ''Mimulus guttatus'' next summer.  Updates are avaliable on the Clemson University Genomics Institute [http://www.genome.clemson.edu/projects/mimulus/ website].
The Joint Genome Institute (JGI/DOE) completed 7X coverage of the ''Mimulus'' genome in Spring 2007.  An assembly of the 7x genome was completed in Summer 2008. Members of the ''Mimulus'' Community are currently annotating the Genome and working on a final assembly of the sequenced scaffolds. The ''Mimulus'' Genome can be accessed though [http://www.phytozome.net/ Phytozome].
*[http://www.mimulusevolution.org/ Mimulus Biological Resource Center]
*[http://www.efloras.org/florataxon.aspx?flora_id=2&taxon_id=120756 Mimulus Flora of China]
*[http://www-biol.paisley.ac.uk/bioref/Plantae_Mimulus/Mimulus.html Biodiversity]


==Field Sites==


===United States===
==Seed Collections==
*[http://www.parks.ca.gov/default.asp?page_id=592 Copperopolis]
Duke University is now the home to the collection of seeds from over 425 populations of ''Mimulus''. The seed collections are primarily composed of seeds from within the ''Mimulus guttatus'' complex. Most of these seeds can be made available for upon request. Please allow a few weeks for orders to be fulfilled. [[Media:‎Mimulus_populations_3_22_09.xls|Mimulus collections list]]
*[http://www.parks.ca.gov/default.asp?page_id=592 Montana de Oro State Park]
*[http://www.redshift.com/~bigcreek/ Big Creek Reserve]
*[http://www-bml.ucdavis.edu/ Bodega Marine Lab]
*[http://nrs.ucop.edu/Reserves/Angelo/Angelolinkingpage.html Angelo Reserve]
*[http://www.nps.gov/redw/ Redwood National Park]
*[http://www.oregonstateparks.org/park_197.php Saddle Mountain]


===Canada===
==Techniques==
*[http://www.portrenfrew.com/botbeach.htm Botanical Beach]
 
*[http://www.pc.gc.ca/pn-np/bc/gwaiihaanas/index_e.asp Gwaii Haanas]
#[[Mimulus:DNA Extraction Protocol|DNA Extraction Protocol]]
*[http://www.bms.bc.ca/ Bamfield Marine Science Center]
#[[Mimulus:Microsatellite recipes|Microsatellite Recipes]]
*[http://www.pc.gc.ca/pn-np/bc/pacificrim/index_e.asp Pacific Rim National Park]
#[[Mimulus:Seed Sterilization|Seed Sterilization]]

Latest revision as of 07:09, 16 November 2014

Mimulus guttatus

The Mimulus Community

This Wiki page has not been updated since 2009.

Announcements

Mimulus Meeting 2006 at Duke University
Mimulus Meeting 2007 at NESCent
  • The Mimulus guttatus IM62 genome assembly and preliminary annotation is now available for search and download from Phytozome.
  • Download the contact info for people who attended the 2007 Mimulus meeting in Durham, NC.
  • There are now 436 Mimulus populations currently stored at the Duke University Seed Stock Center, as of March 2009

The Genus Mimulus

The genus Mimulus (historically "Scrophulariaceae," order Lamiales) has been a model plant system for ecological and evolutionary genetics for over 50 years (Vickery, 1951).

  • Check out the poster of the phylogeny of the Mimulus genus.

The Mimulus Genome

The Joint Genome Institute (JGI/DOE) completed 7X coverage of the Mimulus genome in Spring 2007. An assembly of the 7x genome was completed in Summer 2008. Members of the Mimulus Community are currently annotating the Genome and working on a final assembly of the sequenced scaffolds. The Mimulus Genome can be accessed though Phytozome.


Seed Collections

Duke University is now the home to the collection of seeds from over 425 populations of Mimulus. The seed collections are primarily composed of seeds from within the Mimulus guttatus complex. Most of these seeds can be made available for upon request. Please allow a few weeks for orders to be fulfilled. Mimulus collections list

Techniques

  1. DNA Extraction Protocol
  2. Microsatellite Recipes
  3. Seed Sterilization
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