Registry of Standard Biological Models: Difference between revisions
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|bgcolor="#181860"|<font face="tahoma" size="2" color=#ffffff>A collection of models of biological parts that can be reused and | |bgcolor="#181860"|<font face="tahoma" size="2" color=#ffffff>A collection of models of biological parts that can be freely reused and composed with each other to produce more complex models. A draft implementation of the registry is underway and collaborators are being sought.</font> | ||
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|align="center"|'''Talk to us at''' - [[BioSysBio:abstracts/2007/Vincent_Rouilly | '''BioSysBio 2007''']], [[Registry of Standard Biological Models/Presentation | '''iGEM Jamboree Workshop 2007''']] | |align="center"|'''Talk to us at''' - [[BioSysBio:abstracts/2007/Vincent_Rouilly | '''BioSysBio 2007''']], [http://www.syntheticbiology.ethz.ch/conf_2007 SB3.0], and [[Registry of Standard Biological Models/Presentation | '''iGEM Jamboree Workshop 2007''']] | ||
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|'''Goals''' | |'''Goals''' | ||
*To contribute to the Open Source [[Synthetic Biology]] effort. | *To contribute to the Open Source [[Synthetic Biology]] effort. | ||
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*To provide a forum for modelers to contribute to the BioBricks effort. | *To provide a forum for modelers to contribute to the BioBricks effort. | ||
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|'''Activities''' | |'''Activities''' | ||
*[[/Registry organization|Planning]] the architecture of a registry of | *[[/Registry organization|Planning]] the architecture of a registry of standard biological models. | ||
*Building a [[Registry of Standard Biological Models/Model Catalog|collection]] of standard biological models. | *Building a [[Registry of Standard Biological Models/Model Catalog|collection]] of standard biological models. | ||
*Define a modeling description language that is: | *Define a modeling description language that is: | ||
**Machine readable | **Machine readable | ||
**Capable of describing gene expression networks | **Capable of describing gene expression networks | ||
**Modular (standardized defined inputs/ouputs) | **Modular (standardized defined inputs/ouputs) | ||
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*See [[Registry of Standard Biological Models/CellML Practical|this page]] for a draft implementation. | *See [[Registry of Standard Biological Models/CellML Practical|this page]] for a draft implementation. | ||
*See [[Registry_of_Standard_Biological_Models/Basic_Component_Models|this page]] for a draft on model implementations following CellML 1.1. | *See [[Registry_of_Standard_Biological_Models/Basic_Component_Models|this page]] for a draft on model implementations following CellML 1.1. | ||
Latest revision as of 14:49, 4 October 2007
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