User:Jpedraza: Difference between revisions

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== Research Interests ==
== Research Interests ==
<blockquote>  
<blockquote>  
*animals
Stochasticity in signalling and gene expression<br>
*minerals
Phenotypic variability as survival strategy<br>
Control in synthetic genetic circuits<br>
Evolution of social behaviour (for now, in microorganisms)<br>
Anomalous diffusion, symbolic dynamics and hamiltonian chaos<br>
</blockquote>
</blockquote>


Line 43: Line 46:
== Publications ==
== Publications ==


<biblio>
<biblio> Sci2
        
        
          Stochastic expression of genes driven by a circadian oscillator
          Effects of molecular memory and bursting on fluctuations in gene expression<br>
                 J.R. Chabot, J.M. Pedraza and A.van Oudenaarden
                J.M. Pedraza and J. Paulsson<br>
                 Under review, 2006.
                Science, 319, 339  (2008).
Predicting stochastic gene expression dynamics in single cells
 
     J.T. Mettetal, D. Muzzey, J.M. Pedraza, E.M. Ozbudak and A. van Oudenaarden
</biblio><biblio> Nat
     PNAS USA, 103, 7304, (2006).<br>
 
         Noise in gene regulatory networks
        Stochastic gene expression out-of-steady-state in the cyanobacterial circadian clock<br>
               J. M. Pedraza and A. van Oudenaarden
                 J.R. Chabot, J.M. Pedraza, P. Luitel and A. van Oudenaarden<br>
                 Nature, 450, 1249 (2007).
 
</biblio><biblio> PNAS
 
Predicting stochastic gene expression dynamics in single cells<br>
     J.T. Mettetal, D. Muzzey, J.M. Pedraza, E.M. Ozbudak and A. van Oudenaarden<br>
     PNAS USA, 103, 7304, (2006).
</biblio><biblio>Book1
 
         Noise in gene regulatory networks<br>
               J. M. Pedraza and A. van Oudenaarden<br>
               In Complex Systems Science in BioMedicine (Springer, New York,  2006).
               In Complex Systems Science in BioMedicine (Springer, New York,  2006).
Noise propagation in gene networks
</biblio><biblio>Sci1
               J. M. Pedraza and A. van Oudenaarden
 
Noise propagation in gene networks<br>
               J. M. Pedraza and A. van Oudenaarden<br>
               Science, 307,1965 (2005).
               Science, 307,1965 (2005).
           Non regular languages in the kicked rotor  
</biblio><biblio>PRE
               P.-M. Binder and J. M. Pedraza  
 
           Non regular languages in the kicked rotor <br>
               P.-M. Binder and J. M. Pedraza <br>
               Physical Review E, 62, R5883 (2000).  
               Physical Review E, 62, R5883 (2000).  
           An invertibility paradox  
</biblio><biblio>AJP
               P.-M. Binder, J. M. Pedraza, and S. Garzon.  
 
           An invertibility paradox <br>
               P.-M. Binder, J. M. Pedraza, and S. Garzon. <br>
               American Journal of Physics, 67, 1091 (1999)  
               American Journal of Physics, 67, 1091 (1999)  


</biblio>
</biblio>

Latest revision as of 14:57, 12 February 2008

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Description




Juan Manuel Pedraza

Systems Biology Department
Harvard Medical School
200 Longwood Ave
Boston, MA 02115

firstname_lastname AT hms.harvard.edu

Research Interests

Stochasticity in signalling and gene expression
Phenotypic variability as survival strategy
Control in synthetic genetic circuits
Evolution of social behaviour (for now, in microorganisms)
Anomalous diffusion, symbolic dynamics and hamiltonian chaos

Education

Harvard University , Boston, MA

Postdoctoral Research Fellow in Systems Biology, 2006-

Massachusetts Institute of Technology, Cambridge, MA

Ph.D. in Physics, Feb. 2006.

University of the Andes, Bogota, Colombia

B.Sc. in Mathematics (4 year program), 2000.

B.Sc. in Physics (5 year program), 1999.

Publications

  1. Effects of molecular memory and bursting on fluctuations in gene expression

                   J.M. Pedraza and J. Paulsson
    Science, 319, 339 (2008).
    [Sci2]
  1. Stochastic gene expression out-of-steady-state in the cyanobacterial circadian clock

                   J.R. Chabot, J.M. Pedraza, P. Luitel and A. van Oudenaarden
    Nature, 450, 1249 (2007).
    [Nat]
  1. Predicting stochastic gene expression dynamics in single cells

       J.T. Mettetal, D. Muzzey, J.M. Pedraza, E.M. Ozbudak and A. van Oudenaarden
    PNAS USA, 103, 7304, (2006).
    [PNAS]
  1. Noise in gene regulatory networks

                  J. M. Pedraza and A. van Oudenaarden
    In Complex Systems Science in BioMedicine (Springer, New York, 2006).
    [Book1]
  1. Noise propagation in gene networks

                  J. M. Pedraza and A. van Oudenaarden
    Science, 307,1965 (2005).
    [Sci1]
  1. Non regular languages in the kicked rotor

                  P.-M. Binder and J. M. Pedraza 
    Physical Review E, 62, R5883 (2000).
    [PRE]
  1. An invertibility paradox

                  P.-M. Binder, J. M. Pedraza, and S. Garzon. 
    American Journal of Physics, 67, 1091 (1999)
    [AJP]