Xenopus Community: Difference between revisions
From OpenWetWare
Jump to navigationJump to search
(→Other) |
|||
(One intermediate revision by one other user not shown) | |||
Line 17: | Line 17: | ||
#learning curve for wikitricks (editing, etc) is very good because of all the help and organization on OWW. This will help new XenLabs get wikified. | #learning curve for wikitricks (editing, etc) is very good because of all the help and organization on OWW. This will help new XenLabs get wikified. | ||
#don't have to cope with administrative and technical overhead of setting up/maintaining the software and hardware to run the wiki | #don't have to cope with administrative and technical overhead of setting up/maintaining the software and hardware to run the wiki | ||
#backed up every day -> moving to server with redundant hardware, diesel power backup, multiple server uplinks to internet, 1 hr hardware replacement guarantee, 24hr monitoring... et cetera | |||
#it does not hurt to try, and then move your wiki later. As long as you are using mediawiki (by far the largest wiki distribution), you can always move pages later. It really is just copying and pasting code. In fact, we could probably export the whole lot for you. | |||
'''Advantages to hosting XenWiki through the [[http://www.xenbase.org/ XenBase]] server''' | '''Advantages to hosting XenWiki through the [[http://www.xenbase.org/ XenBase]] server''' | ||
#direct links possible between Xenwiki and XenBase areas | #direct links possible between Xenwiki and XenBase areas | ||
#*this is possible (and probably easier) on OWW as we have experience with other databases (BioBricks), and could probably easily modify it to contain your information. | |||
#control | #control | ||
#private spaces -> one could implement a scheme (not technically possible yet, but could be programmed in) where individual pages have different rights. Essentially, giving users the ability to place read/write controls on data. | |||
==What should be on this wiki vs what is already on JGI and XenBase== | ==What should be on this wiki vs what is already on JGI and XenBase== | ||
Line 64: | Line 68: | ||
==Other== | ==Other== | ||
*[http://www.frogstore.com/home.php The Frog Store] Isn't the internet wonderful? | *[http://www.frogstore.com/home.php The Frog Store] Isn't the internet wonderful? | ||
<wikionly> | |||
<font size=4>'''Recent changes'''</font>{{Special:Recentchanges/Xenopus Community}} | |||
</wikionly> |
Latest revision as of 19:31, 17 June 2008
XenCommunity
Under Construction. Edits and suggestions welcome.
- See Synthetic Biology Community Pages for ideas.
- Edit help for this section or to make your own lab wiki
- Editing is easy with wiki edit instructions.
- It was a wonderful meeting in Japan, especially the meeting summary given by Jerry.
Discussion about having XenWiki on OWW or hosted at [XenBase]
- XenBase could set up and host a wiki for the Xen Community on its new server, or the XenWiki could be here on OWW. I justed added a few thoughts.
Advantages to hosting XenWiki on OWW
- Broader involvement with the non-Xenopus scientific community
- Xen Labs will learn about other work going on in OWW labs, esp. Synthetic Biology
- OWW has a lab-tweaked mediawiki
- very interactive scientists with many interests are managing the OWW site
- learning curve for wikitricks (editing, etc) is very good because of all the help and organization on OWW. This will help new XenLabs get wikified.
- don't have to cope with administrative and technical overhead of setting up/maintaining the software and hardware to run the wiki
- backed up every day -> moving to server with redundant hardware, diesel power backup, multiple server uplinks to internet, 1 hr hardware replacement guarantee, 24hr monitoring... et cetera
- it does not hurt to try, and then move your wiki later. As long as you are using mediawiki (by far the largest wiki distribution), you can always move pages later. It really is just copying and pasting code. In fact, we could probably export the whole lot for you.
Advantages to hosting XenWiki through the [XenBase] server
- direct links possible between Xenwiki and XenBase areas
- this is possible (and probably easier) on OWW as we have experience with other databases (BioBricks), and could probably easily modify it to contain your information.
- control
- private spaces -> one could implement a scheme (not technically possible yet, but could be programmed in) where individual pages have different rights. Essentially, giving users the ability to place read/write controls on data.
What should be on this wiki vs what is already on JGI and XenBase
Discuss and decide what we need so we can ask NIH, get involved with NIH "report" recommendations
- notes from 11th Xen Meeting: Instructions for submitting a proposal NHGRC: see 'white paper' instructions on web site (need the link)
- program announcement due Jan 18 2007, document on web site but applications that do the best produce a resource for the community and also do good science, US labs and non-US labs are considered.
Next Meeting
- will be in Germany, details TBA
- contact committee for ideas for next meeting
Collected from Bruce Blumberg's excellent Xine
- Xine in html format, back issues
Links to useful sources of information for Xenopus (in no particular order) general interest and utility
- Trans NIH Xenopus initiative
- Harland lab X. tropicalis site
- Grainger lab X. tropicalis site
- Amy Sater's X. tropicalis genetic map site
- Information on the X. tropicalis listserver
- Peter Vize's Xenopus über database
- Zimmerman Lab X. tropicalis website, database of mutants
- metazome
Genomic resources
- XDB at NIBB - Naoto Ueno's X. laevis EST database
- Xenopus gene collection
- full length collection at the Gurdon Institute
- JGI X. tropicalis genome site with browser and other info
- AXELDB - Christof Niehrs' Xenopus database
- Xenbase
Other
- The Frog Store Isn't the internet wonderful?
<wikionly>
Recent changes
List of abbreviations:
- N
- This edit created a new page (also see list of new pages)
- m
- This is a minor edit
- b
- This edit was performed by a bot
- (±123)
- The page size changed by this number of bytes
26 April 2024
11:38 | Hu:Publications diffhist +308 Hugangqing talk contribs |
|
N 08:47 | The Paper that Launched Microfluidics - Xi Ning 2 changes history +16,815 [Xning098 (2×)] | |||
|
08:47 (cur | prev) −1 Xning098 talk contribs (→Introduction) | ||||
N |
|
08:43 (cur | prev) +16,816 Xning098 talk contribs (Created page with "{{Template:CHEM-ENG590E}} ==Introduction== Microfluidics is the science and technology of systems that process or manipulate small (10 <sup> -18 </sup> to 10 <sup>−18 </sup> litres) amounts of fluids, using channels with dimensions of tens to hundreds of micrometres, as stated by George Whitesides. <sup> https://doi.org/10.1038/nature05058 1 </sup>. Microfluidic devices are microchemical systems such as labs on the chip, organs on the chip and plants on the chip....") |
|
08:43 | CHEM-ENG590E:Wiki Textbook 3 changes history 0 [Xning098 (3×)] | |||
|
08:43 (cur | prev) 0 Xning098 talk contribs Tag: Manual revert | ||||
|
08:42 (cur | prev) 0 Xning098 talk contribs Tag: Manual revert | ||||
|
08:41 (cur | prev) 0 Xning098 talk contribs |
|
08:20 | (Upload log) [Xning098 (6×)] | |||
|
08:20 Xning098 talk contribs uploaded File:XiNingFigure2.jpeg | ||||
|
08:14 Xning098 talk contribs uploaded File:Figure4Drawn.XiNing.jpeg | ||||
|
08:00 Xning098 talk contribs uploaded File:DrawnFigure4XiNing.jpeg | ||||
|
07:38 Xning098 talk contribs uploaded File:XiNingDrawnSetup2.png | ||||
|
07:35 Xning098 talk contribs uploaded a new version of File:Figure 2 Set-up1.png | ||||
|
07:24 Xning098 talk contribs uploaded File:DrawnElectoosmoticflow.jpeg |
05:25 | Ernesto-Perez-Rueda:Contact diffhist −94 Ernesto Perez-Rueda talk contribs |
25 April 2024
</wikionly>