Ernesto-Perez-Rueda :Book Chapters

10. Ribeiro AM, Cerqueira C, Borges A, dos Reis Ribeiro R, Perez-Rueda E., Nicolás M. 2024. Regulatory small RNAs as antimicrobial drug targets. [1]

9. Tenorio-Salgado S, Sganzerla G, Perez-Rueda E.. 2023. Genome Alignments. Brenners Encyclopedia of Genetics, third edition. [2]

8. Ledesma L, Hernandez-Guerrero R, Perez-Rueda E.. 2022. Prediction of DNA-Binding Transcription Factors in Bacteria and Archaea Genomes. E Peeters and I Bervoets (eds.), Prokaryotic Gene Regulation: Methods and Protocols, Methods in Molecular Biology, vol. 2516. [3]

7. Fabiana Nicolás M, de Oliveira Cerqueira e Costa M, Ramos PI, Trindade dos Santos M, Perez-Rueda E., Marti MA, Fernandez Do Porto D, Turjanski A. 2020. Integrating Omics Data to Prioritize Target Genes in Pathogenic Bacteria Springer Computational Biology Series. Networks in Systems Biology: Applications on Disease Modeling. Springer Computational Biology Series. “Networks in Systems Biology: Applications on Disease Modeling. [4]

6. Apolinar–Hernández MM, Perez-Rueda E., O´Connor-Sánchez A. 2019. Descubrimiento y caracterización de dos nuevos genes de proteasas S8 encontrados por escrutinio funcional de una biblioteca metagenómica del Acuífero de Yucatán. SMBB. 279-295. In spanish.

5. Poot-Hernández AC, Rodríguez-Vázquez K, Hernández-Guerrero R, Perez-Rueda E. 2019. De los genomas al metabolismo celular: el estudio sistemático y comparativo del metabolismo. SMBB. 335-358. In spanish

4. Arena-Ortiz, L. Rojas-Herrera, R. Apodaca-Hernandez, J. Perez-Rueda E. 2013. Flora Bacteriana en Camarones. En Recursos Genéticos Microbianos en la zona Golfo-Sureste de México. Volumen I. Editores M. Gamboa, R. Rojas. In press.

3. Perez-Rueda, E. Rivera-Gomez, N. Martinez-Nunez, MA. Tenorio-Salgado, S. 2012. Evolution of DNA-binding Transcription Factors and Regulatory Networks in Prokaryotes in: Evolution of regulatory networks in bacteria Horizon Scientific Press. [5]

2. Hernández-Montes, G. Armenta-Medina, D. Perez-Rueda, E. 2012. Evolution of metabolism: A network perspective of the amino acid biosynthesis pathways. Encyclopedia of Systems Biology. Springer. [6]

1. Collado-Vides J, Moreno-Hagelsieb G, Perez-Rueda, E. et al. 2002 Genomics of Gene Regulation: The view from Escherichia coli in: Gene Regulation and Metabolism: Post-Genomic Computational Approaches eds. Collado-Vides J. and Hofestadt R. MIT Press.[7]