IGEM:Harvard/2006/vlau/Notebook/2006-7-31

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Rxn Mixtures

Working Stocks Description Pre-Working Stocks Water Total
c3.2A no latches, no aptamers 1 (94 μL), 2 (28 μL), 3 (30 μL), 4 (3 μL), 5 (3 μL), 8 (2 μL), 9 (0 μL) 40 μL 200 μL
c3.2H.core latch design 2, in aptamers 1 (94 μL), 2 (28 μL), 3 (30 μL), 5 (3 μL), 6 (3 μL) 32 μL 200 μL
c3.2H.latches latch design 2, in aptamers 10 (2 μL), 12 (2 μL), 13 (0 μL), 15 (2 μL), 16 (4 μL) - -
c3.2I.core latch design 2, out aptamers 1 (94 μL), 2 (28 μL), 3 (30 μL), 4 (3 μL), 7 (3 μL) 32 μL 200 μL
c3.2I.latches latch design 2, out aptamers 10 (2 μL), 12 (2 μL), 13 (0 μL), 15 (2 μL), 16 (4 μL) - -
c4.0A no latches, no aptamers 1 (66 μL), 2 (33 μL), 3 (33 μL), 4 (4 μL), 6 (4 μL), 10 (4 μL), 15 (2 μL), 16 (2 μL) 52 μL 200 μL
c4.0H.core latch design 2, in aptamers 1 (66 μL), 2 (33 μL)), 3 (33 μL)), 4 (4 μL), 7 (4 μL)) 44 μL 200 μL
c4.0H.latches latch design 2, in aptamers 9 (4 μL), 13 (2 μL)), 14 (2 μL)), 23 (4 μL)), 24 (2 μL)), 25 (2 μL)) - -
c4.0I.core latch design 2, out aptamers 1 (66 μL), 2 (33 μL), 3 (33 μL), 5 (4 μL), 6 (4 μL) 44 μL 200 μL
c4.0I.latches latch design 2, out aptamers 9 (4 μL), 13 (2 μL)), 14 (2 μL)), 23 (4 μL)), 24 (2 μL)), 25 (2 μL)) - -


Experiment Scaffold Oligos Folding buffer dH2O total volume
c3.2.A 9 μL p7308 16 μL (250 nM) 4 μL 10x 11 μL 40 μL
c3.2H 9 μL p7308 16 μL (250 nM) 4 μL 10x 11 μL 40 μL
c3.2I 9 μL p7308 16 μL (250 nM) 4 μL 10x 11 μL 40 μL
c4.0A 9 μL p7308 16 μL (250 nM) 4 μL 10x 11 μL 40 μL
c4.0H 9 μL p7308 16 μL (250 nM) 4 μL 10x 11 μL 40 μL
c4.0I 9 μL p7308 16 μL (250 nM) 4 μL 10x 11 μL 40 μL
no scaffold - 16 μL (250 nM) 4 μL 10x 20 μL 40 μL
no oligos 9 μL p7308 - 4 μL 10x 27 μL 40 μL