User contributions for Schumer
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30 April 2024
- 10:3710:37, 30 April 2024 diff hist +1 Schumer lab: Commonly used workflows →Using GATK variant calls to generate pseudofastas
- 10:3710:37, 30 April 2024 diff hist +10 Schumer lab: Commonly used workflows →Using GATK variant calls to generate pseudofastas
- 10:3510:35, 30 April 2024 diff hist +4 Schumer lab: Commonly used workflows →Using GATK variant calls to generate pseudofastas
- 10:3410:34, 30 April 2024 diff hist +9 Schumer lab: Commonly used workflows →Using GATK variant calls to generate pseudofastas
- 10:3310:33, 30 April 2024 diff hist +1 Schumer lab: Commonly used workflows →Using GATK variant calls to generate pseudofastas
- 10:3310:33, 30 April 2024 diff hist +7 Schumer lab: Commonly used workflows →Using GATK variant calls to generate pseudofastas
- 10:3210:32, 30 April 2024 diff hist +3,209 Schumer lab: Commonly used workflows No edit summary
26 February 2024
- 08:2208:22, 26 February 2024 diff hist +638 Schumer lab: Commonly used workflows →For first time use
16 January 2024
- 12:4912:49, 16 January 2024 diff hist +2 Schumer lab: Commonly used workflows →Mapping RNAseq data and transcript quantification
- 12:4812:48, 16 January 2024 diff hist +410 Schumer lab: Commonly used workflows →Mapping RNAseq data and transcript quantification
- 11:4411:44, 16 January 2024 diff hist 0 Schumer lab:Github and bioinformatics wiki No edit summary current
- 10:4710:47, 16 January 2024 diff hist +7 Schumer lab:Github and bioinformatics wiki →Where to find important files and resources?
- 10:4610:46, 16 January 2024 diff hist −1 Schumer lab: Data currently available on Oak →Data currently available on Oak= current
- 10:4610:46, 16 January 2024 diff hist +76 Schumer lab:Github and bioinformatics wiki →Where to find important files and resources?
18 December 2023
- 17:1817:18, 18 December 2023 diff hist −2 Schumer lab: Backing up raw data →Syncing folders with new data current
- 17:1717:17, 18 December 2023 diff hist +25 Schumer lab: Backing up raw data →Syncing folders with new data
- 17:1717:17, 18 December 2023 diff hist 0 Schumer lab: Backing up raw data →Back up your raw data on external hard drives or the SRA
8 November 2023
- 18:0618:06, 8 November 2023 diff hist +94 N Schumer lab: Passaging cells Created page with "refer to the "passaging caudal cells" protocol in the cell culture protocols folder on dropbox" current
- 16:5416:54, 8 November 2023 diff hist +265 Schumer lab: Commonly used workflows →Pseudohaploid calls for GWAS or population structure analysis from low coverage data
- 16:4116:41, 8 November 2023 diff hist +3,508 Schumer lab: Commonly used workflows →Mapping Binary & Continuous Traits with PLINK
- 16:0116:01, 8 November 2023 diff hist +341 Schumer lab: NEB Monarch Tissue HMW DNA extraction No edit summary current
- 15:4015:40, 8 November 2023 diff hist +1 Schumer lab: Commonly used workflows →Mapping Binary & Continuous Traits with PLINK
- 15:4015:40, 8 November 2023 diff hist +1,011 Schumer lab: Commonly used workflows →Mapping Binary & Continuous Traits with PLINK
- 15:2515:25, 8 November 2023 diff hist +7 Schumer lab: Commonly used workflows →Mapping Binary & Continuous Traits with PLINK
- 15:2315:23, 8 November 2023 diff hist +2,223 Schumer lab: Commonly used workflows →Mapping Binary & Continuous Traits with PLINK
- 14:1014:10, 8 November 2023 diff hist +40 Schumer lab: Changing media No edit summary current
- 14:0814:08, 8 November 2023 diff hist +481 Schumer lab: Changing media No edit summary
- 14:0814:08, 8 November 2023 diff hist +18 Schumer lab: DNA extraction No edit summary current
- 14:0514:05, 8 November 2023 diff hist +23 N Schumer lab: NEB Monarch Tissue HMW DNA extraction Created page with "[Insert stuff here] -JJ"
- 14:0514:05, 8 November 2023 diff hist +121 Schumer lab:Wet lab/Sequencing No edit summary current
- 13:5513:55, 8 November 2023 diff hist +32 Schumer lab: DNA quantification and dilution No edit summary current
- 13:5213:52, 8 November 2023 diff hist +320 N Schumer lab: Changing media Created page with "In Xiphophorus cell culture, (as of 11/08/23) media is changed on Monday, Wednesday and Friday. Premade complete media aliquots should be stored in the 4 degree fridge in a 50 mL falcon tube. 12 well plates should have a total volume of 2 mL media in each well, while T25 flasks should have a total of 5 mL of media."
- 13:4913:49, 8 November 2023 diff hist +46 Schumer lab:Wet lab/Sequencing No edit summary
- 13:4113:41, 8 November 2023 diff hist 0 Schumer lab: DNA extraction No edit summary
- 13:3613:36, 8 November 2023 diff hist +56 Schumer lab:Wet lab/Sequencing No edit summary
- 13:3413:34, 8 November 2023 diff hist +18 Schumer lab:Wet lab/Sequencing No edit summary
- 12:3612:36, 8 November 2023 diff hist −1 Schumer lab: Download data to Sherlock from Admera →Download data with ftp current
- 12:3612:36, 8 November 2023 diff hist +2 Schumer lab: Download data to Sherlock from Admera →Download data with ftp
- 12:3412:34, 8 November 2023 diff hist −28 Schumer lab: Download data to Sherlock from Admera →Download data with ftp
- 12:3312:33, 8 November 2023 diff hist +793 Schumer lab: Download data to Sherlock from Admera →Download data with ftp
- 12:1512:15, 8 November 2023 diff hist +38 Schumer lab: Download data to Sherlock from Admera →Download data with ftp
21 June 2023
- 15:1115:11, 21 June 2023 diff hist +2 Schumer lab: Commonly used workflows →Pseudohaploid calls for GWAS or population structure analysis from low coverage data
- 15:1115:11, 21 June 2023 diff hist +2,281 Schumer lab: Commonly used workflows No edit summary
8 June 2023
- 15:1015:10, 8 June 2023 diff hist +293 Schumer lab: Commonly used scripts →Scripts to average by site or in windows current
- 15:0715:07, 8 June 2023 diff hist +169 Schumer lab: Commonly used scripts →Scripts that manipulate or summarize fasta files
- 15:0515:05, 8 June 2023 diff hist +506 Schumer lab: Commonly used scripts →Scripts that manipulate or summarize fasta files
23 May 2023
- 15:5915:59, 23 May 2023 diff hist +1,024 Schumer lab: Processed files available on Oak No edit summary current
- 15:5015:50, 23 May 2023 diff hist +287 Schumer lab: Backing up raw data →Back up your raw data on external hard drives or the SRA
- 15:4715:47, 23 May 2023 diff hist +294 N Schumer lab: Data currently available on Oak Created page with "==Data currently available on Oak=== We keep an up-to-date log of data currently available on Oak in the following google sheet. If you download any raw data, please make sure to update it! https://docs.google.com/spreadsheets/d/1dUBAmaz2bNa-LppWxFZ7Vymld-jxrDbh-HC_WFjXSzA/edit#gid=89601434"
- 15:3715:37, 23 May 2023 diff hist +431 Schumer lab: Depositing data on Oak →Introduction current
