User:Jarle Pahr/Metabolic engineering
Notes on metabolic engineering:
Copeland 2012. Computational tools for metabolic engineering: http://www.sciencedirect.com/science/article/pii/S1096717612000250
Keasling 2012. Synthetic biology and the development of tools for metabolic engineering: http://www.sciencedirect.com/science/article/pii/S1096717612000055
D. Chandran, F.T. Bergmann, H.M. Sauro. Computer-aided design of biological circuits using TinkerCell.
Persons and researchg groups
Jay D Keasling.
Metabolic Engineering: http://www.journals.elsevier.com/metabolic-engineering/
Microbial Cell factories
Journal of Biological Engineering
Modification of glucose import capacity in Escherichia coli: physiologic consequences and utility for improving DNA vaccine production: http://www.microbialcellfactories.com/content/12/1/42
Demain, A.L. and S. Sanches. 2007. Microbial synthesis of primary metabolites: Current advances and future prospects. In Fermentation microbiology and biotechnology (eds. Mansi, Bryce, Demain and Allman).
Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels: http://www.nature.com/nature/journal/v451/n7174/full/nature06450.html
Metabolic engineeringof Escherichia coli for theproductionofsuccinate from glycerol: http://www.sciencedirect.com/science/article/pii/S1096717610000698
Microbial production of fatty-acid-derived fuels and chemicals from plant biomass: http://www.nature.com/nature/journal/v463/n7280/full/nature08721.html
ePathBrick: A Synthetic Biology Platform for Engineering Metabolic Pathways in E. coli
Synthetic biology devices as tools for metabolic engineering: http://www.sciencedirect.com/science/article/pii/S1369703X12000903
Parts plus pipes: Synthetic biology approaches to metabolic engineering: http://www.sciencedirect.com/science/article/pii/S1096717611001042
Martin, V. J. , Pitera, D. J. , Withers, S. T. , Newman, J. D. & Keasling, J. D. Engineering a mevalonate pathway in Escherichia coli for production of terpenoids. Nature Biotechnol. 21, 796–802 (2003
P.D. Karp, R. Caspi. A survey of metabolic databases emphasizing the MetaCyc family