Van Oudenaarden Lab:C18A3.8
Progress:
Probes designed: (03-01-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>C18A3.8 (hlh-14 spliced coding region)
atgatgctagaatctttaattgttattttcttgaactctcacagctgtaagattttccagatttgtacctcctcccaatc ctttgacctcgaactcttcaactcctccctctataatttggtgccaatacggtttgtgccaatatccaccctcctagtcc cgcccatcagattgtcccgtcccgcctttcctctcaccattagccttattcattcagttcacccacactcactcctagcc accaccgtcttccctctctctttttattttcccgcccaacaaaaaaaggaagcaatggccaagaagaatcaagttgccag aaatgagagagaacgcaagcgagttcatcaggtaaaccatggtttcgacgtgctccgcaaccgtcttcaaccaaagaatc ataccaagaaatggagcaaagcagacacccttcgtgaagctgtcaagtatattcaacaacttcaggttcttctcaatcaa gatccacagcaaccatcagtttcttcttcaactcccgactacacgatgaacaacagcaacaacttcaacaattatgccgt aaaagaagaattctcgatgtatttgcctcaaaactattgcccacaaaatcaaatgtcagtacctcatggagatgtttccc ataacttcaattctccaacatcatcagtttcctcatcttcttactcaccaactcaaatgtgttatcctccagtttcatat tccaattatccacaccattaa
tttggaaaatcgatattttagtattcccttcttatcattcaaagatctggtgcatttacgggt ctccatactgtttttgtttttaatattaattgttagatttttttccaaaaaactcaatagccaataaatcaattcctaca cat
Name of probe set: hlh-14
Probes designed on Mon, 01 Mar 10 14:34:11 -0700
40 probes designed for target of length 887 (target too short for 48 probes)
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
caattaaagattctagcatc, hlh-14_1, 1, 3, 30
ctgtgagagttcaagaaaat, hlh-14_2, 2, 25, 35
acaaatctggaaaatcttac, hlh-14_3, 3, 47, 30
aggtcaaaggattgggagga, hlh-14_4, 4, 70, 50
gagggaggagttgaagagtt, hlh-14_5, 5, 92, 50
accgtattggcaccaaatta, hlh-14_6, 6, 114, 40
aggagggtggatattggcac, hlh-14_7, 7, 136, 55
ggacaatctgatgggcggga, hlh-14_8, 8, 158, 60
tggtgagaggaaaggcggga, hlh-14_9, 9, 180, 60
tgaactgaatgaataaggct, hlh-14_10, 10, 202, 35
ggtggctaggagtgagtgtg, hlh-14_11, 11, 224, 60
aaaaagagagagggaagacg, hlh-14_12, 12, 246, 45
tttttttgttgggcgggaaa, hlh-14_13, 13, 268, 40
attcttcttggccattgctt, hlh-14_14, 14, 290, 40
ctctctcatttctggcaact, hlh-14_15, 15, 312, 45
acctgatgaactcgcttgcg, hlh-14_16, 16, 334, 55
gagcacgtcgaaaccatggt, hlh-14_17, 17, 356, 55
tctttggttgaagacggttg, hlh-14_18, 18, 378, 45
ttgctccatttcttggtatg, hlh-14_19, 19, 400, 40
agcttcacgaagggtgtctg, hlh-14_20, 20, 422, 55
gaagttgttgaatatacttg, hlh-14_21, 21, 444, 30
ggatcttgattgagaagaac, hlh-14_22, 22, 466, 40
agaagaaactgatggttgct, hlh-14_23, 23, 488, 40
tcatcgtgtagtcgggagtt, hlh-14_24, 24, 510, 50
ttgttgaagttgttgctgtt, hlh-14_25, 25, 532, 35
gaattcttcttttacggcat, hlh-14_26, 26, 554, 35
agttttgaggcaaatacatc, hlh-14_27, 27, 576, 35
gacatttgattttgtgggca, hlh-14_28, 28, 598, 40
ggaaacatctccatgaggta, hlh-14_29, 29, 620, 45
atgttggagaattgaagtta, hlh-14_30, 30, 642, 30
taagaagatgaggaaactga, hlh-14_31, 31, 664, 35
ataacacatttgagttggtg, hlh-14_32, 32, 686, 35
aattggaatatgaaactgga, hlh-14_33, 33, 708, 30
tttccaaattaatggtgtgg, hlh-14_34, 34, 730, 35
aagggaatactaaaatatcg, hlh-14_35, 35, 752, 30
caccagatctttgaatgata, hlh-14_36, 36, 774, 35
acagtatggagacccgtaaa, hlh-14_37, 37, 796, 45
acaattaatattaaaaacaa, hlh-14_38, 38, 818, 10
gagttttttggaaaaaaatc, hlh-14_39, 39, 840, 25
gtaggaattgatttattggc, hlh-14_40, 40, 864, 35
