IGEM:IMPERIAL/2006/Sandbox: Difference between revisions

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{| style="width:100%; height:20px" border="1"
{| style="width:100%; height:20px" border="1"
|-  
|-  
! [[IGEM:IMPERIAL/2006/Calendar| Calendar]] !! [[IGEM:IMPERIAL/2006/LabCalendar| Lab Notebook]] !! [[IGEM:IMPERIAL/2006/project/parts| Testing]] !! [[IGEM:IMPERIAL/2006/project/parts/lab_status| Lab Status]] !! [[IGEM:IMPERIAL/2006/Photos|Photos]] !! [[IGEM:IMPERIAL/2006/Resources|Resources]]   
! [[IGEM:IMPERIAL/2006/Calendar| Calendar]] !! [[IGEM:IMPERIAL/2006/Before_the_Jamboree|To Do List]] !! [[IGEM:IMPERIAL/2006/Presentation| Presentation]] !! [[IGEM:IMPERIAL/2006/Contributions| Our Contributions]] !! [[IGEM:IMPERIAL/2006/Acknowledgments| Acknowledgments]] !! [[IGEM:IMPERIAL/2006/Resources|Resources]]   
|}
|}


{| class="wikitable" border="0" cellpadding="5" cellspacing="30" style="text-align:center"
{| class="wikitable" border="0" cellpadding="5" cellspacing="30" style="text-align:center"
!width="800" align="left" valign="top" style="background:#ADEAEA; color:black"|
!width="800" align="left" valign="top" style="background:#ADEAEA; color:black"|
=='''[[IGEM:IMPERIAL/2006/The_Talk_Page|Project Discussion]]'''==
==[[Image:Icon_board.png]] <font color="red"> <b>Breaking News</b></font color="red"> ==
==[[Image:Icon_board.png]] <font color="red"> <b>Breaking News</b></font color="red"> ==
<showhide>
===[http://www.imperial.ac.uk/P8045.htm iGEM Press Release on Imperial Website]===
__HIDER__<hide>
Moral of the story: Never trust the press :)
</hide>
</showhide>
<showhide>
===[[IGEM:IMPERIAL/2006/ProjectCalendar/2006-8-17 | >>>Current issues on testing protocols ...]]===
===<u><font face="verdana">The prey cells are waiting to be attacked - (''14 Aug 2006'')</font></u>===
[[Image:PreyCellDigest.JPG|200px|right]]
After a series of challenging ligations, the first major breakthrough in the Wetlab has been achieved: The prey cells have been completed and their genetically engineered sequence has now been verified - with confirmation from gel electrophoresis and sequencing. <br>
Read more... __HIDER__
<hide>
The gel on the right hand side shows some of the evidence that the plasmid (containing the part with the test construct for the prey cell) has been successfully ligated. It shows the control digest and the resulting DNA bands, which lengths are as expected. Additionally, it has just recently been confirmed from sequencing that the part contains the correct DNA bases.
</hide>
</showhide>


<showhide>
===<u><font face="verdana">A visit to Cambridge - iGEM teams from the UK meet to share their experience - (''26 July 2006'')</font></u>===
Read more... __HIDER__
<hide>
[[Image:UK_iGEM0074.JPG|300px|right]]


On a hot and sunny day, the I.CoLi team met early in the morning at King's Cross Station, London. You might wonder about the destination: CAMBRIDGE. <br>
On 24/25 July 2006, Cambridge University hosted the first UK iGEM meeting. The teams from Edinburgh and Imperial College visited Cambridge and all three iGEM teams exchanged their experience and ideas from the first weeks as well as taking part in a "mystery challenge" ... <br>


Shortly before lunch, the I.CoLi team met with the Cambridge team and after being shown through the Wetlabs at Cambridge, both teams had a picnic together outside. Instantly, everyone got caught up in talks and so time flew by until the arrival of the team from Edinburgh (whose train unfortunately broke down half-way during their journey). <br>
>>>'''Major reorganisation of the WIKI underway''':
To get to know more about the different projects each team was working on, presentations were given, followed by short discussions. It was very interesting to see that on the one hand, a common structure could be seen in all team's approaches to their particular idea but on the other hand, the ways of handling a problem or distribution of tasks/organization within a team could differ remarkably.
*need to populate [[IGEM:IMPERIAL/2006/project/Oscillator/project_browser | part pages]] from existing documentation
*need logos to present our projects: Oscillator, PoPs blocker, Biosensor
*take care of [[IGEM:IMPERIAL/2006/Created_Pages | orphaned pages]] found


As a special highlight of the day, iGEM instructors prepared a "mystery challenge":
>>>'''PRESENTATION''' during BioEng departmental seminar
The task for this challenge was to build a boat in 60min. - the fastest boat crossing the river would win! After an hour of intensive work, 5 brilliant boats were ready to go! Despite the promising-looking designs none of the boats succeeded in crossing the river in the end. The best boat, however, went a significant distance along the river (against the currents!) but was never seen again.  
* October 25th, 16.30
* room: 664, MechEng.


The eventful day ended with a cheerful dinner in the city of Cambridge.
===<u><font face="verdana">[[IGEM:IMPERIAL/2006/Breaking_News| News Archive]]</font></u>===
 
A big thanks to Cambridge for hosting the UK iGEM meeting and making it a memorable iGEM day!
 
==[[IGEM:IMPERIAL/2006/Calendar/2006-7-24|Pictures from UK iGEM meeting in Cambridge]]==
</hide>
</showhide>
 
<showhide>
===<u><font face="verdana">Innovative Ideas emerging in new field of Synthetic Biology - (''20 July 2006'')</font></u>===
Read more... 
__HIDER__
<hide>
 
[[Image:CIMG5754(2).JPG|180px|right]]
<font face="verdana" color="#404040"><font size="+1">A</font>FTER a week of brainstorming and research, the I.CoLi team suddenly appeared with promising ideas in building a new system from standard biological parts. Three main ideas cristallized among the group of young people, which are being pursued further:
#[[IGEM:IMPERIAL/2006/project/Oscillator|Oscillator]] (based on Predator Prey dynamics)
#[[IGEM:IMPERIAL/2006/project|BioClock]]
#[[IGEM:IMPERIAL/2006/project|BioCD]]
Special emphasis is being put on the first idea and the past days have been spent on modelling (see Fashion section), further development in the Wetlab (see Science section) and on assembling and designing new parts (see Fashion section).
 
Further our idea, the I.CoLi team presented their project at Cambridge University on 24 July 2006.  The presentation can be found [http://openwetware.org/images/4/42/IGEM_@_Imperial.ppt here].  A big thank you goes to the Cambridge iGEM team for hosting us!
 
</hide></showhide>
<br>
|}
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*'''[[IGEM:IMPERIAL/2006/project/primers|Primer design]]
*'''[[IGEM:IMPERIAL/2006/project/primers|Primer design]]
Info on the Primers + PCR'''
Info on the Primers'''
 
*'''[[IGEM:IMPERIAL/2006/Least Square Curve Fit| Least Square Curve Fit on Matlab with J37016 Extracted Parameters]]'''
How to do the least square curve fit on Matlab


!width="400" align="left" valign="top" style="background:#FDF8FF; color:black"|
!width="400" align="left" valign="top" style="background:#FDF8FF; color:black"|


==[[Image:Icon_board.png]] Science==
==[[Image:Icon_board.png]] Science==
*'''[[IGEM:IMPERIAL/2006/Calendar| Calendar]]'''
Find out more about our hectic work schedule and plans for the future


*'''[[IGEM:IMPERIAL/2006/LabCalendar| Lab Notebook]]'''
*'''[[IGEM:IMPERIAL/2006/LabCalendar| Lab Notebook]]'''
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Info about our current [[IGEM:IMPERIAL/2006/project/parts/lab_status| lab status]]
Info about our current [[IGEM:IMPERIAL/2006/project/parts/lab_status| lab status]]
*'''[[IGEM:IMPERIAL/2006/Calendar| Calendar]]'''
Find out more about our hectic work schedule and plans for the future


*'''[[IGEM:IMPERIAL/2006/project/parts|Testing]]'''
*'''[[IGEM:IMPERIAL/2006/project/parts|Testing]]'''
Documents outlining how we intend to test our constructs can be found here
Documents outlining how we intend to test our constructs can be found here


*'''[[IGEM:IMPERIAL/Protocols|Protocols]]'''
*'''[[IGEM:IMPERIAL/2006/Protocols|Protocols]]'''
List of our protocols
List of our protocols
*'''[[IGEM:IMPERIAL/Equipment|Equipment]]'''
Important Information about our equipment


*'''[[IGEM:IMPERIAL/2006/Ligation Page|Ligation Page]]'''
*'''[[IGEM:IMPERIAL/2006/Ligation Page|Ligation Page]]'''
Page containing all of the ligation details
Page containing all of the ligation details
*'''[[IGEM:IMPERIAL/Results|Results]]'''
We have data...lots and lots of data...
*'''[[IGEM:IMPERIAL/2006/project/sequencing|Sequencing]]


|}
|}
{| class="wikitable" border="0" cellpadding="5" cellspacing="1" style="text-align:center"
{| class="wikitable" border="0" cellpadding="5" cellspacing="1" style="text-align:center"
!width="400" align="left" valign="top" style="background:#FFEBCC; color:black"|
!width="400" align="left" valign="top" style="background:#EED2EE; color:black"|


==[[Image:Icon_board.png]] Education==
==[[Image:Icon_board.png]] Education==
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==[[Image:Icon_board.png]] Opinion/Editorial==
==[[Image:Icon_board.png]] Opinion/Editorial==
*'''Today's Mood Index: infinity/10'''
*'''Today's Mood Index: 4/10'''
We have finally got rid of Tom @_@
So much to do and so little time to do it in...
 


*'''[[IGEM:IMPERIAL/2006/The Talk Page|The Talk Page]]'''
*'''[[IGEM:IMPERIAL/2006/The Talk Page|Project Discussion]]'''
Discuss issues with members of the team.
Discuss issues with members of the team.


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*[[User:Baijiongjun|Jiongjun Bai]]
*[[User:Baijiongjun|Jiongjun Bai]]
*[[User:Johnsy|John Sy]]  
*[[User:Johnsy|John Sy]]  
*[http://openwetware.org/wiki/User:JohnChattaway '''John Chattaway''']]
*[[User:JohnChattaway|John Chattaway]]
*[[User:Jonny|Jonathan Wells]]
*[[User:Jonny|Jonathan Wells]]
*[[User:Tom|Tom Hinson]]
*[[User:Tom|Tom Hinson]]
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*[http://www3.imperial.ac.uk/people/p.freemont Prof. Paul Freemont]
*[http://www3.imperial.ac.uk/people/p.freemont Prof. Paul Freemont]
*[http://www3.imperial.ac.uk/people/d.mann Dr. David Mann]
*[http://www3.imperial.ac.uk/people/d.mann Dr. David Mann]
*Kirsten Jensen
*[[User:Vincent|Vincent Rouilly]]  
*[[User:Vincent|Vincent Rouilly]]  
*[[User:chuehloo|Chueh-Loo Poh]]  
*[[User:chuehloo|Chueh-Loo Poh]]
*[[User:SxE00|Matthieu Bultelle]]
</hide></showhide>
</hide></showhide>
Even more celebrities are involved in this exciting project. Find out more with the link above
Even more celebrities are involved in this exciting project. Find out more with the link above


<showhide>
<showhide>
'''People John is harrassing for aiiA'''__HIDER__
'''Acknowledgements'''__HIDER__
<hide>
<hide>
*[http://www.bio.ic.ac.uk/research/hdw Dr Huw Williams]
Throughout the project, many people have helped us in various ways - we are very thankful for all their precious time & efforts spent to support iGEM at Imperial ! Special thanks to everyone on the [http://openwetware.org/wiki/IGEM:IMPERIAL/2006/Acknowledgments Acknowledgements Page].  
*[http://www.bio.cam.ac.uk/~salmond/ Prof George Salmond]
*'''Ben Ryall'''
</hide></showhide>
</hide></showhide>


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*Location of our visitors
*Location of our visitors
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<html>
<a href="http://clustrmaps.com/counter/maps.php?url=http://openwetware.org/wiki/IGEM:IMPERIAL/2006" id="clustrMapsLink"><img src="http://clustrmaps.com/counter/index2.php?url=http://openwetware.org/wiki/IGEM:IMPERIAL/2006" border=1 alt="Locations of visitors to this page"onError="this.onError=null; this.src='http://www.meetomatic.com/images/clustrmaps-back-soon.jpg'; document.getElementById('clustrMapsLink').href='http://clustrmaps.com/'">
<a href="http://clustrmaps.com/counter/maps.php?url=http://openwetware.org/wiki/IGEM:IMPERIAL/2006&type=small&clusters=no&map=world" id="clustrMapsLink"><img src="http://clustrmaps.com/counter/index2.php?url=http://openwetware.org/wiki/IGEM:IMPERIAL/2006" border=1 alt="Locations of visitors to this page"onError="this.onError=null; this.src='http://www.meetomatic.com/images/clustrmaps-back-soon.jpg'; document.getElementById('clustrMapsLink').href='http://clustrmaps.com/'">
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==[[Image:Icon_board.png]] Arts & Entertainment==
==[[Image:Icon_board.png]] Arts & Entertainment==
[[Image:The_ICoLi_Team0017a.JPG|thumb|300px|right|The I.CoLi Team on the top of the Biochemistry building with view on campus (Queens Tower in background)]]  
[[Image:IGEM GroupPhotos0015.JPG|thumb|400px|right|The Imperial College iGEM team and instructors on the terrace of the Biochemistry building]]
*'''[[IGEM:IMPERIAL/2006/Quotes|Inspirational Quotes]]'''
*'''[[IGEM:IMPERIAL/2006/Quotes|Inspirational Quotes]]'''
Celebrity Quotes and more...
Celebrity Quotes and more...
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Featuring only the latest fashion and celebrities around Imperial College
Featuring only the latest fashion and celebrities around Imperial College
*'''[[IGEM:IMPERIAL/2006/Logo| Logo Suggestions]]
*'''[[IGEM:IMPERIAL/2006/Logo| Logo Suggestions]]
*'''[[IGEM:IMPERIAL/2006/Sandbox2| Mini-Sandbox]]
Initial proposals for our logo
*'''[[IGEM:IMPERIAL/2006/Sandbox| Sandbox]]
|}
|}
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==Imperial iGEM=={{Special:Recentchanges/b=IGEM:IMPERIAL/2006&limit=50}}
==Imperial iGEM=={{Special:Recentchanges/b=IGEM:IMPERIAL/2006&limit=50}}
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Latest revision as of 19:16, 29 October 2006

the newsletter of Imperial College London iGEM 2006


Calendar To Do List Presentation Our Contributions Acknowledgments Resources

Project Discussion

Breaking News

>>>Major reorganisation of the WIKI underway:

  • need to populate part pages from existing documentation
  • need logos to present our projects: Oscillator, PoPs blocker, Biosensor
  • take care of orphaned pages found

>>>PRESENTATION during BioEng departmental seminar

  • October 25th, 16.30
  • room: 664, MechEng.

News Archive

Fashion

Here you can view our top models - featuring world-renowned LV (Lotka-Volterra not Louis Vuitton) Design

These are the results of creative moments - the detailed design of the oscillator

The details of implementation - the parts for final assembly, parts for testing and creation of new parts

Just in case we finish our project early, we have a lot more things to work on, stage 2 and future developments...

Info on the Primers

How to do the least square curve fit on Matlab

Science

Find out more about our hectic work schedule and plans for the future

Working in the Wetlab - all about our trials, successes and... failures

Info about our current lab status

Documents outlining how we intend to test our constructs can be found here

List of our protocols

Page containing all of the ligation details

We have data...lots and lots of data...


Education

References to helpful and inspiring papers

Meetings in the journal clubs - papers and presentations

Everything you should really know when to tackle a problem in Synthetic Biology - Expand your knowledge about engineering concepts and biological systems when browsing through our collection of lecture notes

Essential links for iGEM 2006


Opinion/Editorial

  • Today's Mood Index: 4/10

So much to do and so little time to do it in...


Discuss issues with members of the team.

Celebrity Profile

<showhide> The Undergrads __HIDER__ <hide>

</hide></showhide> <showhide> Do you want to get to know the celebrities working on this project? Click the link above to learn more about all the members of I.CoLi 2006 (Imperial College London iGEM 2006)

The Advisors__HIDER__ <hide>

</hide></showhide> Even more celebrities are involved in this exciting project. Find out more with the link above

<showhide> Acknowledgements__HIDER__ <hide> Throughout the project, many people have helped us in various ways - we are very thankful for all their precious time & efforts spent to support iGEM at Imperial ! Special thanks to everyone on the Acknowledgements Page. </hide></showhide>

Weather

A summary of our highs and lows ... the brainstorming sessions and their outcomes

  • Location of our visitors

<html> <a href="http://clustrmaps.com/counter/maps.php?url=http://openwetware.org/wiki/IGEM:IMPERIAL/2006&type=small&clusters=no&map=world" id="clustrMapsLink"><img src="http://clustrmaps.com/counter/index2.php?url=http://openwetware.org/wiki/IGEM:IMPERIAL/2006" border=1 alt="Locations of visitors to this page"onError="this.onError=null; this.src='http://www.meetomatic.com/images/clustrmaps-back-soon.jpg'; document.getElementById('clustrMapsLink').href='http://clustrmaps.com/'"> </a> </html>


Arts & Entertainment

The Imperial College iGEM team and instructors on the terrace of the Biochemistry building

Celebrity Quotes and more...

Featuring only the latest fashion and celebrities around Imperial College

Initial proposals for our logo

==Imperial iGEM==

List of abbreviations:
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