CHE.496/2009/Assignments
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Assigned Readings
Assignment 1: Introduction
- Synthetic biology: promises and challenges link
Assignment 2: Foundational technologies
Assignment 3: Engineering principles
- Synthetic biology - putting engineering into biology link
- Synthetic biology: new engineering rules for an emerging discipline link
Assignment 4: Genetic programming
- Idempotent vector design for standard assembly of biobricks link
- Genetic parts to program bacteria link
Assignment 5: Natural biological parts
- Another side of genomics: Synthetic biology as a means for the exploitation of whole-genome sequence information link
- Codon bias and heterologous protein expression link
Assignment 6: Practical applications
- Advances in synthetic biology: on the path from prototypes to applications link
- Molecular switches for cellular sensors link
Assignment 7: Engineering biology
Assignment 8: Biological machines
- Designing biological systems link
- Biology by design: Reduction and synthesis of cellular components and behavior link
Assignment 9: Genetic circuit engineering (part 1)
- A synthetic oscillatory network of transcriptional regulators link
- Construction of a genetic toggle switch in Escherichia coli link
Assignment 10: Genetic circuit engineering (part 2)
- Environmentally controlled invasion of cancer cells by engineered bacteria link
- Environmental signal integration by a modular AND gate link
Assignment 11: Metabolic pathway engineering
- Bioengineering novel in vitro metabolic pathways using synthetic biology link
- Synthetic biology for synthetic chemistry link
Assignment 12: Systems biology and synthetic biology
- Systems biology as a foundation for genome-scale synthetic biology link
- Network Benchmarking: A Happy Marriage between Systems and Synthetic Biology link
Assignment 13: Biological networks