Harvard:Biophysics 101/2007:Schedule

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Biophysics 101: Genomics, Computing, and Economics

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Date Presenter(s) Topic Slides
February 1George ChurchIntroduction
Human "experiment"
February 6George Church
Shawn Douglas
Results from "experiment"
combinatorics, binomial distributions
exponentials in Excel
Python walkthrough
February 8George ChurchEntropy & Complexity
Memory & Storage
Probability Distributions
February 13George ChurchBinomial, Poisson and Normal distributions
Class discussion
February 15George ChurchEaster Island & Discussion
Quantifying bioenergy requirements
Flux balance analysis
February 20George ChurchFlux balance continued... PPT
February 22 Morten Sommer and Shawn Douglas Final project brainstorming PPT
February 27George ChurchHapMap DataPPT
March 1George ChurchNutri/PharmacogenomicsPPT
March 6Class discussionProjects ---
March 8Class discussionProjects in more detailPPT
March 13George ChurchMutationsPPT
March 15Class discussionHomework: Automated sequence analysis---
March 20Class discussion Division of labor---
March 22George Church, Visitor: Esther Dyson Case Study #2: Narcolepsy PDF
April 3Morten Sommer and Shawn Douglas Visitor: Joe Chou
Project planning
April 5Morten Sommer and Shawn Douglas Group work ---
April 10George Church Project discussion ---
April 12 George Church Multisequence alignment, Hidden Markov Models PPT
April 17 George Church, Visitor: Kirk Maxey Project discussion---
April 19George Church More Bayes, epistasis, allele frequencies PPT
April 24 All Project planning
April 26George Church
May 1
May 3
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