User talk:Lee Farrand
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You could use Google Scholar with those two pieces of software as keyword . Google returns a few results even though PubMed doesn't.
Whether this kind of modelling is reliable is debated. I'd check out some structure modelling reviews to get a feel for the debate and the opinion of the pros in the field, i.e. not me ;-) Although, the hits are quite specific. You could try with: bioinformatics[mesh] Protein Structure, Tertiary[mesh] review[pt]. Google Scholar again is easier to use with common sense keywords .
Check out CASP - http://en.wikipedia.org/wiki/CASP It's a competition where people test how good their models really are. This can give you a good idea of what works and is quite up to date research.
Welcome to OWW. Why don't you start a page here with what you find out about protein structure prediction. Could be like you notebook on this question.
Best, Jakob Suckale 13:20, 14 February 2009 (EST)