IGEM:IMPERIAL/2006/project/Oscillator/project browser/Full System

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Super Parts This is the whole system
Actual Part
Sub Parts Prey Construct Predator Construct


Motivations

  • Oscillators are already a fundamental building block in traditional engineering applications
  • We wish to build a synthetic biological oscillator that can become a fundamental building block in future synthetic biological applications
  • Previous oscillators have been attempted (such as the Repressilator by Elowitz and Leibler in 2000) but they all generally shared the following problems:
  • Noise
  • Instability
  • Inflexible (i.e. lack of control over amplitude and frequency)
  • Based on these past limitations, we determined the specifications for our oscillator:
  • The oscillations should remain stable for greater than 10 cycles
  • It should have a high signal to noise ratio
  • It should be flexible (we should be able to control amplitude and frequency)
  • It should have connectivity (should be able to be integrated into another system)

Part interface

(describe your black-box approach, define properties of inputs/outputs)

INPUTS OUTPUTS
Prey molecule Prey molecule

(don't forget to insert a relevant image of your black box.)

Expected behavior and performances

System level specifications
Properties Comments
Range ?
Expected output



Latency ?
Robustness Oscillations should be stable for greater then 10 cycles
Variability There should be a high signal to noise ratio
Flexibility Amplitude and frequency should be controllable
Connectivity The oscillator should be able to be connected to other systems

Open issues

  • list known issues